Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm12857-201ENSMUST00000117678 592 ntBASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Gm15515-201ENSMUST00000117827 822 ntBASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Gm5419-201ENSMUST00000119301 527 ntBASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Gm15610-201ENSMUST00000120584 195 ntBASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Gm5706-201ENSMUST00000181525 993 ntBASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcb1Q9Z0H3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Gm14058-201ENSMUST00000116082 735 ntBASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Gm22902-201ENSMUST00000158488 302 ntBASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Gm8100-201ENSMUST00000182906 988 ntBASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Smarcb1Q9Z0H3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.65□□□□□ -0.38
Smarcb1Q9Z0H3 Gm6905-201ENSMUST00000205729 511 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms