Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gm14109-201ENSMUST00000118814 309 ntBASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Gm11597-201ENSMUST00000121423 964 ntBASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 AA914427-201ENSMUST00000193194 1166 ntBASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Gm8712-201ENSMUST00000221090 701 ntBASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clcf1Q9QZM3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Gm13570-201ENSMUST00000140763 309 ntBASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Rmrp-201ENSMUST00000157463 271 ntBASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Gm24845-201ENSMUST00000158034 109 ntBASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clcf1Q9QZM3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clcf1Q9QZM3 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms