Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Gm27501-201ENSMUST00000183599 107 ntBASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Gm44405-201ENSMUST00000198952 126 ntBASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Gm45925-201ENSMUST00000218882 744 ntBASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.03□□□□□ -0.64
Sec61a2Q9JLR1 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.02□□□□□ -0.64
Sec61a2Q9JLR1 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Sec61a2Q9JLR1 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sec61a2Q9JLR1 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.02□□□□□ -0.64
Sec61a2Q9JLR1 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sec61a2Q9JLR1 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Sec61a2Q9JLR1 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sec61a2Q9JLR1 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Sec61a2Q9JLR1 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sec61a2Q9JLR1 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Gm15198-201ENSMUST00000117283 177 ntBASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Gm14760-201ENSMUST00000121831 999 ntBASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Olfr284-202ENSMUST00000206647 966 ntBASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Gm5781-201ENSMUST00000219792 443 ntBASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a2Q9JLR1 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a2Q9JLR1 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a2Q9JLR1 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a2Q9JLR1 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Sec61a2Q9JLR1 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a2Q9JLR1 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.01□□□□□ -0.65
Sec61a2Q9JLR1 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a2Q9JLR1 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sec61a2Q9JLR1 Gm11964-201ENSMUST00000120982 444 ntBASIC11.01□□□□□ -0.65
Sec61a2Q9JLR1 Gm11434-201ENSMUST00000122379 629 ntBASIC11.01□□□□□ -0.65
Sec61a2Q9JLR1 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms