Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Gm15610-201ENSMUST00000120584 195 ntBASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Gm26361-201ENSMUST00000158868 186 ntBASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Gm4607-201ENSMUST00000206649 577 ntBASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Matn2-203ENSMUST00000226766 3252 ntBASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Upk3aQ9JKX8 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Gm13996-201ENSMUST00000118456 430 ntBASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Gm17931-201ENSMUST00000208132 634 ntBASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk3aQ9JKX8 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Gm43962-201ENSMUST00000203898 190 ntBASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3aQ9JKX8 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.54
Upk3aQ9JKX8 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.71□□□□□ -0.54
Upk3aQ9JKX8 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Upk3aQ9JKX8 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Upk3aQ9JKX8 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms