Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.72□□□□□ -0.53
Ube4bQ9ES00 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Gm7730-201ENSMUST00000212486 454 ntBASIC11.72□□□□□ -0.53
Ube4bQ9ES00 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ube4bQ9ES00 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Gm42550-201ENSMUST00000201553 960 ntBASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ube4bQ9ES00 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Ube4bQ9ES00 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ube4bQ9ES00 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.54
Ube4bQ9ES00 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Ube4bQ9ES00 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ube4bQ9ES00 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
Ube4bQ9ES00 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.54
Ube4bQ9ES00 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ube4bQ9ES00 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ube4bQ9ES00 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ube4bQ9ES00 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ube4bQ9ES00 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.71□□□□□ -0.54
Ube4bQ9ES00 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Ube4bQ9ES00 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ube4bQ9ES00 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Ube4bQ9ES00 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ube4bQ9ES00 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.71□□□□□ -0.54
Ube4bQ9ES00 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ube4bQ9ES00 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Ube4bQ9ES00 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms