Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tubb3Q9ERD7 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tubb3Q9ERD7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Tubb3Q9ERD7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Gm24255-201ENSMUST00000104481 128 ntBASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Gm11222-201ENSMUST00000119005 738 ntBASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Gm13492-201ENSMUST00000119772 665 ntBASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tubb3Q9ERD7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Gm4857-201ENSMUST00000192718 785 ntBASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb3Q9ERD7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms