Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp2aQ9DB34 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp2aQ9DB34 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Chmp2aQ9DB34 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.75□□□□□ -0.37
Chmp2aQ9DB34 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Gm24934-201ENSMUST00000103764 111 ntBASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Gm11930-201ENSMUST00000117788 190 ntBASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Gm9630-201ENSMUST00000178304 885 ntBASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.74□□□□□ -0.37
Chmp2aQ9DB34 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Gm26083-201ENSMUST00000157904 193 ntBASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Gzmn-202ENSMUST00000225535 989 ntBASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.73□□□□□ -0.37
Chmp2aQ9DB34 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Gm22323-201ENSMUST00000103832 109 ntBASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.72□□□□□ -0.37
Chmp2aQ9DB34 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms