Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Gm27847-201ENSMUST00000183711 107 ntBASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Gm27375-201ENSMUST00000183799 107 ntBASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Gm45930-201ENSMUST00000221330 292 ntBASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Gm12502-201ENSMUST00000120197 444 ntBASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Gm9002-201ENSMUST00000178437 499 ntBASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Gm44958-201ENSMUST00000203734 736 ntBASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Gm7561-201ENSMUST00000211203 886 ntBASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp5Q9D7S9 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Gm45776-201ENSMUST00000212366 1522 ntBASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Gm44405-201ENSMUST00000198952 126 ntBASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 AC125209.1-201ENSMUST00000225812 766 ntBASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Gm10268-201ENSMUST00000085340 555 ntBASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Gm6091-201ENSMUST00000098307 165 ntBASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 AC108858.2-201ENSMUST00000228186 1425 ntBASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Chmp5Q9D7S9 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms