Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nop56Q9D6Z1 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nop56Q9D6Z1 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.63□□□□□ -0.39
Nop56Q9D6Z1 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nop56Q9D6Z1 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nop56Q9D6Z1 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nop56Q9D6Z1 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nop56Q9D6Z1 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nop56Q9D6Z1 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nop56Q9D6Z1 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Rmrp-201ENSMUST00000157463 271 ntBASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nop56Q9D6Z1 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nop56Q9D6Z1 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nop56Q9D6Z1 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nop56Q9D6Z1 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms