Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.33□□□□□ -0.44
Sf3a3Q9D554 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.33□□□□□ -0.44
Sf3a3Q9D554 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3a3Q9D554 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Gm28693-202ENSMUST00000190758 331 ntBASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3a3Q9D554 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.31□□□□□ -0.44
Sf3a3Q9D554 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Gm29667-201ENSMUST00000190817 490 ntBASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3a3Q9D554 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms