Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.3□□□□□ -0.6
Trim13Q9CYB0 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Gm11637-201ENSMUST00000120601 592 ntBASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Gm16479-201ENSMUST00000121706 932 ntBASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.29□□□□□ -0.6
Trim13Q9CYB0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Gm37042-201ENSMUST00000193816 581 ntBASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Gm8515-201ENSMUST00000194852 576 ntBASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Gm8463-201ENSMUST00000208573 613 ntBASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Gm6180-201ENSMUST00000065243 498 ntBASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Gm45251-201ENSMUST00000209486 1465 ntBASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim13Q9CYB0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Snord83b-201ENSMUST00000104546 94 ntBASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Gm13612-201ENSMUST00000119276 390 ntBASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Gm37922-201ENSMUST00000195596 455 ntBASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Gm18515-201ENSMUST00000219755 797 ntBASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Gm8598-201ENSMUST00000221184 836 ntBASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim13Q9CYB0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms