Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lrrc40Q9CRC8 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrc40Q9CRC8 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrc40Q9CRC8 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrc40Q9CRC8 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrc40Q9CRC8 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lrrc40Q9CRC8 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.14□□□□□ -0.47
Lrrc40Q9CRC8 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Gm12036-201ENSMUST00000120008 530 ntBASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Gm19309-201ENSMUST00000218295 205 ntBASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.13□□□□□ -0.47
Lrrc40Q9CRC8 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Gm37424-201ENSMUST00000191727 561 ntBASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Gm42627-201ENSMUST00000197347 224 ntBASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lrrc40Q9CRC8 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Lrrc40Q9CRC8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Lrrc40Q9CRC8 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrc40Q9CRC8 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrc40Q9CRC8 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrc40Q9CRC8 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrc40Q9CRC8 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrc40Q9CRC8 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrc40Q9CRC8 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lrrc40Q9CRC8 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.11□□□□□ -0.47
Lrrc40Q9CRC8 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms