Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Gm23119-201ENSMUST00000158610 140 ntBASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Gm9211-201ENSMUST00000182882 975 ntBASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Prpf8Q99PV0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.02□□□□□ -0.8
Prpf8Q99PV0 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Gm10774-201ENSMUST00000188689 204 ntBASIC10.02□□□□□ -0.8
Prpf8Q99PV0 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.02□□□□□ -0.8
Prpf8Q99PV0 AC135469.1-201ENSMUST00000225984 772 ntBASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Prpf8Q99PV0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Gm10179-201ENSMUST00000086233 688 ntBASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Gm21811-201ENSMUST00000096485 930 ntBASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.8
Prpf8Q99PV0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Rmrp-201ENSMUST00000157463 271 ntBASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Gm23218-201ENSMUST00000158124 276 ntBASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Prpf8Q99PV0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Prpf8Q99PV0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.01□□□□□ -0.81
Prpf8Q99PV0 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Prpf8Q99PV0 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.01□□□□□ -0.81
Prpf8Q99PV0 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Prpf8Q99PV0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Prpf8Q99PV0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Prpf8Q99PV0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Prpf8Q99PV0 Gm24934-201ENSMUST00000103764 111 ntBASIC10.01□□□□□ -0.81
Prpf8Q99PV0 Gm15711-201ENSMUST00000118889 535 ntBASIC10.01□□□□□ -0.81
Prpf8Q99PV0 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.01□□□□□ -0.81
Prpf8Q99PV0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.01□□□□□ -0.81
Prpf8Q99PV0 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Prpf8Q99PV0 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC10.01□□□□□ -0.81
Prpf8Q99PV0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Prpf8Q99PV0 Gm9358-201ENSMUST00000183067 927 ntBASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms