Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.21□□□□□ -0.45
Trim33Q99PP7 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Gm24231-201ENSMUST00000104315 133 ntBASIC12.21□□□□□ -0.45
Trim33Q99PP7 Gm15370-201ENSMUST00000117158 253 ntBASIC12.21□□□□□ -0.45
Trim33Q99PP7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Gm13342-201ENSMUST00000121055 207 ntBASIC12.21□□□□□ -0.45
Trim33Q99PP7 Gm14760-201ENSMUST00000121831 999 ntBASIC12.21□□□□□ -0.45
Trim33Q99PP7 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim33Q99PP7 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Gm37293-201ENSMUST00000191658 295 ntBASIC12.21□□□□□ -0.45
Trim33Q99PP7 Gm37489-201ENSMUST00000191883 159 ntBASIC12.21□□□□□ -0.45
Trim33Q99PP7 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim33Q99PP7 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim33Q99PP7 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.21□□□□□ -0.45
Trim33Q99PP7 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.21□□□□□ -0.46
Trim33Q99PP7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trim33Q99PP7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim33Q99PP7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim33Q99PP7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim33Q99PP7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim33Q99PP7 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim33Q99PP7 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim33Q99PP7 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim33Q99PP7 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.21□□□□□ -0.46
Trim33Q99PP7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.2□□□□□ -0.46
Trim33Q99PP7 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.2□□□□□ -0.46
Trim33Q99PP7 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.2□□□□□ -0.46
Trim33Q99PP7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Gm4986-201ENSMUST00000119731 549 ntBASIC12.2□□□□□ -0.46
Trim33Q99PP7 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Gm2546-201ENSMUST00000182630 991 ntBASIC12.2□□□□□ -0.46
Trim33Q99PP7 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Gm27516-201ENSMUST00000184237 98 ntBASIC12.2□□□□□ -0.46
Trim33Q99PP7 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Gm8227-201ENSMUST00000223306 571 ntBASIC12.2□□□□□ -0.46
Trim33Q99PP7 Morn2-202ENSMUST00000227729 656 ntBASIC12.2□□□□□ -0.46
Trim33Q99PP7 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Gm9877-201ENSMUST00000064271 2627 ntBASIC12.2□□□□□ -0.46
Trim33Q99PP7 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim33Q99PP7 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.19□□□□□ -0.46
Trim33Q99PP7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim33Q99PP7 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.19□□□□□ -0.46
Trim33Q99PP7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms