Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Gm25700-201ENSMUST00000177693 110 ntBASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gtf2ird2Q99NI3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Gtf2ird2Q99NI3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Gm18212-201ENSMUST00000211678 889 ntBASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gtf2ird2Q99NI3 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gtf2ird2Q99NI3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms