Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b1Q99NB9 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b1Q99NB9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Sf3b1Q99NB9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b1Q99NB9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b1Q99NB9 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b1Q99NB9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Gm11450-201ENSMUST00000121144 333 ntBASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Mir7677-201ENSMUST00000184226 67 ntBASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Gm44124-201ENSMUST00000204159 472 ntBASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sf3b1Q99NB9 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Gm9062-201ENSMUST00000117712 727 ntBASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Gm44100-201ENSMUST00000204329 436 ntBASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Gm5455-201ENSMUST00000058710 715 ntBASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sf3b1Q99NB9 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b1Q99NB9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b1Q99NB9 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b1Q99NB9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Sf3b1Q99NB9 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.96□□□□□ -0.34
Sf3b1Q99NB9 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b1Q99NB9 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b1Q99NB9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Sf3b1Q99NB9 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b1Q99NB9 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b1Q99NB9 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b1Q99NB9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b1Q99NB9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b1Q99NB9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b1Q99NB9 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Gm270-201ENSMUST00000223010 976 ntBASIC12.95□□□□□ -0.34
Sf3b1Q99NB9 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms