Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Gm8100-201ENSMUST00000182906 988 ntBASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Gm29808-201ENSMUST00000194419 468 ntBASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Gm43969-201ENSMUST00000204833 535 ntBASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col25a1Q99MQ5 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Gm8737-201ENSMUST00000122208 642 ntBASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Rprl1-201ENSMUST00000158050 327 ntBASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Gm9135-201ENSMUST00000182963 990 ntBASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Gm807-202ENSMUST00000224929 408 ntBASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 AC138716.2-201ENSMUST00000226670 1016 ntBASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 AC107763.1-201ENSMUST00000226082 1365 ntBASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col25a1Q99MQ5 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Gm24398-201ENSMUST00000157870 109 ntBASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Gm43186-201ENSMUST00000198130 824 ntBASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col25a1Q99MQ5 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms