Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rnf111Q99ML9 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Gm13492-201ENSMUST00000119772 665 ntBASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Gm15703-201ENSMUST00000120250 880 ntBASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Gm25261-201ENSMUST00000157416 134 ntBASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Gm8738-201ENSMUST00000172606 329 ntBASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Gm3890-201ENSMUST00000182416 207 ntBASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.86□□□□□ -0.51
Rnf111Q99ML9 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.86□□□□□ -0.51
Rnf111Q99ML9 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.86□□□□□ -0.51
Rnf111Q99ML9 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Gm14716-201ENSMUST00000120138 718 ntBASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Gm27514-201ENSMUST00000183692 110 ntBASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Gm37008-201ENSMUST00000195712 319 ntBASIC11.85□□□□□ -0.51
Rnf111Q99ML9 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Gm5904-201ENSMUST00000210286 865 ntBASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf111Q99ML9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.84□□□□□ -0.51
Rnf111Q99ML9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 155.5 ms