Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Gm6007-201ENSMUST00000208170 823 ntBASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp1b1Q99LU0 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Gm44405-201ENSMUST00000198952 126 ntBASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chmp1b1Q99LU0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Daam2-202ENSMUST00000224595 1926 ntBASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Gm25261-201ENSMUST00000157416 134 ntBASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.56□□□□□ -0.56
Chmp1b1Q99LU0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms