Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap3Q99LM2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cdk5rap3Q99LM2 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap3Q99LM2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap3Q99LM2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk5rap3Q99LM2 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Gm12390-201ENSMUST00000117897 397 ntBASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Gm39404-201ENSMUST00000216350 313 ntBASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.65□□□□□ -0.38
Cdk5rap3Q99LM2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.65□□□□□ -0.39
Cdk5rap3Q99LM2 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdk5rap3Q99LM2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Gm24830-201ENSMUST00000102024 166 ntBASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Gm5781-201ENSMUST00000219792 443 ntBASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Gm26232-201ENSMUST00000083360 166 ntBASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.64□□□□□ -0.39
Cdk5rap3Q99LM2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.63□□□□□ -0.39
Cdk5rap3Q99LM2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms