Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdk9Q99J95 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdk9Q99J95 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Gm23363-201ENSMUST00000175024 79 ntBASIC12.31□□□□□ -0.44
Cdk9Q99J95 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.31□□□□□ -0.44
Cdk9Q99J95 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.31□□□□□ -0.44
Cdk9Q99J95 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk9Q99J95 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.3□□□□□ -0.44
Cdk9Q99J95 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.3□□□□□ -0.44
Cdk9Q99J95 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.3□□□□□ -0.44
Cdk9Q99J95 Gm9002-201ENSMUST00000178437 499 ntBASIC12.3□□□□□ -0.44
Cdk9Q99J95 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Gm2495-201ENSMUST00000191160 466 ntBASIC12.3□□□□□ -0.44
Cdk9Q99J95 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.3□□□□□ -0.44
Cdk9Q99J95 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdk9Q99J95 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk9Q99J95 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk9Q99J95 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk9Q99J95 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk9Q99J95 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk9Q99J95 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk9Q99J95 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Cdk9Q99J95 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk9Q99J95 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk9Q99J95 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk9Q99J95 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk9Q99J95 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cdk9Q99J95 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk9Q99J95 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.29□□□□□ -0.44
Cdk9Q99J95 Gm8099-201ENSMUST00000200510 742 ntBASIC12.29□□□□□ -0.44
Cdk9Q99J95 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk9Q99J95 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk9Q99J95 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk9Q99J95 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdk9Q99J95 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdk9Q99J95 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms