Protein–RNA interactions for Protein: Q923D4

Sf3b5, Splicing factor 3B subunit 5, mousemouse

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b5Q923D4 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sf3b5Q923D4 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Gm11989-201ENSMUST00000117240 672 ntBASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Gm11362-201ENSMUST00000118838 850 ntBASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Gm14247-201ENSMUST00000120950 237 ntBASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 AA914427-201ENSMUST00000193194 1166 ntBASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Gzmn-202ENSMUST00000225535 989 ntBASIC10.8□□□□□ -0.68
Sf3b5Q923D4 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sf3b5Q923D4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sf3b5Q923D4 Gm25890-201ENSMUST00000177643 165 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms