Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.14□□□□□ -0.15
Smc1bQ920F6 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Gm9555-201ENSMUST00000200908 583 ntBASIC14.14□□□□□ -0.15
Smc1bQ920F6 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Ntng1-201ENSMUST00000051253 327 ntBASIC14.14□□□□□ -0.15
Smc1bQ920F6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc1bQ920F6 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.13□□□□□ -0.15
Smc1bQ920F6 Gm11667-201ENSMUST00000119828 486 ntBASIC14.13□□□□□ -0.15
Smc1bQ920F6 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Gm6963-201ENSMUST00000147879 379 ntBASIC14.13□□□□□ -0.15
Smc1bQ920F6 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Gm37666-201ENSMUST00000194110 866 ntBASIC14.13□□□□□ -0.15
Smc1bQ920F6 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.13□□□□□ -0.15
Smc1bQ920F6 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.13□□□□□ -0.15
Smc1bQ920F6 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Smc1bQ920F6 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Smc1bQ920F6 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smc1bQ920F6 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.12□□□□□ -0.15
Smc1bQ920F6 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.12□□□□□ -0.15
Smc1bQ920F6 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.12□□□□□ -0.15
Smc1bQ920F6 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Gm10179-201ENSMUST00000086233 688 ntBASIC14.12□□□□□ -0.15
Smc1bQ920F6 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc1bQ920F6 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms