Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Gm12036-201ENSMUST00000120008 530 ntBASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Gm14247-201ENSMUST00000120950 237 ntBASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Gm6621-201ENSMUST00000193251 772 ntBASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Gm9368-201ENSMUST00000219348 831 ntBASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Gm8712-201ENSMUST00000221090 701 ntBASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb1Q91Y08 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Gm15547-201ENSMUST00000122152 333 ntBASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Gm21769-201ENSMUST00000211922 111 ntBASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb1Q91Y08 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms