Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhga4Q91XY4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdhga4Q91XY4 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Pcdhga4Q91XY4 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Gm13736-201ENSMUST00000119272 253 ntBASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Gm15703-201ENSMUST00000120250 880 ntBASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga4Q91XY4 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Rmrp-201ENSMUST00000157463 271 ntBASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Gm7584-201ENSMUST00000175829 940 ntBASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhga4Q91XY4 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhga4Q91XY4 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms