Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Gm8365-201ENSMUST00000197334 648 ntBASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga6Q91XY2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Gm9358-201ENSMUST00000183067 927 ntBASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Gm18893-201ENSMUST00000198416 943 ntBASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga6Q91XY2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Gm23949-201ENSMUST00000104027 127 ntBASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Gm12380-201ENSMUST00000119012 544 ntBASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Gm11941-201ENSMUST00000119904 610 ntBASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Gm14832-201ENSMUST00000121289 322 ntBASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Gm17391-201ENSMUST00000171036 126 ntBASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Gm8018-201ENSMUST00000173536 789 ntBASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Gm19931-201ENSMUST00000198920 368 ntBASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhga6Q91XY2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms