Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Gm13366-201ENSMUST00000122198 970 ntBASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Gm14126-201ENSMUST00000122345 395 ntBASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Gm15429-201ENSMUST00000151268 798 ntBASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Gm16296-201ENSMUST00000159905 325 ntBASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Gm28631-201ENSMUST00000190740 334 ntBASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Gm18473-201ENSMUST00000220543 868 ntBASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa1Q8VEE4 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Gm7441-201ENSMUST00000220697 1074 ntBASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Gm26226-201ENSMUST00000082509 116 ntBASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa1Q8VEE4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.34□□□□□ -0.43
Rpa1Q8VEE4 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms