Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkd2Q8VE28 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Gm13665-201ENSMUST00000120830 528 ntBASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Gm38317-201ENSMUST00000195564 343 ntBASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.17□□□□□ -0.62
Nkd2Q8VE28 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkd2Q8VE28 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Gm11930-201ENSMUST00000117788 190 ntBASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Gm24990-201ENSMUST00000157406 323 ntBASIC11.16□□□□□ -0.62
Nkd2Q8VE28 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Gm3786-201ENSMUST00000202659 378 ntBASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkd2Q8VE28 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms