Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Gm26232-201ENSMUST00000083360 166 ntBASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps39Q8R5L3 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vps39Q8R5L3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Gm23912-201ENSMUST00000104687 87 ntBASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.22□□□□□ -0.45
Vps39Q8R5L3 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms