Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.33□□□□□ -0.44
Clip4Q8CI96 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.33□□□□□ -0.44
Clip4Q8CI96 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.33□□□□□ -0.44
Clip4Q8CI96 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.33□□□□□ -0.44
Clip4Q8CI96 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.33□□□□□ -0.44
Clip4Q8CI96 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.33□□□□□ -0.44
Clip4Q8CI96 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clip4Q8CI96 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Gm44364-201ENSMUST00000198368 141 ntBASIC12.32□□□□□ -0.44
Clip4Q8CI96 Gm6334-201ENSMUST00000207083 228 ntBASIC12.32□□□□□ -0.44
Clip4Q8CI96 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Gm45865-201ENSMUST00000211815 945 ntBASIC12.32□□□□□ -0.44
Clip4Q8CI96 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.32□□□□□ -0.44
Clip4Q8CI96 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.32□□□□□ -0.44
Clip4Q8CI96 Cts7-204ENSMUST00000225321 1257 ntBASIC12.32□□□□□ -0.44
Clip4Q8CI96 Morn2-202ENSMUST00000227729 656 ntBASIC12.32□□□□□ -0.44
Clip4Q8CI96 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Clip4Q8CI96 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Clip4Q8CI96 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.31□□□□□ -0.44
Clip4Q8CI96 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Clip4Q8CI96 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Gm2991-201ENSMUST00000173338 480 ntBASIC12.31□□□□□ -0.44
Clip4Q8CI96 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Gm6621-201ENSMUST00000193251 772 ntBASIC12.31□□□□□ -0.44
Clip4Q8CI96 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clip4Q8CI96 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms