Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Gm12957-201ENSMUST00000117835 377 ntBASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Gm11978-201ENSMUST00000122315 466 ntBASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Gm10268-201ENSMUST00000085340 555 ntBASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.95□□□□□ -0.66
Rft1Q8C3B8 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rft1Q8C3B8 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Cog3-203ENSMUST00000227473 4197 ntBASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Gm27682-201ENSMUST00000183930 110 ntBASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rft1Q8C3B8 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Gm26927-201ENSMUST00000182385 965 ntBASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Gm28693-202ENSMUST00000190758 331 ntBASIC10.93□□□□□ -0.66
Rft1Q8C3B8 Gm37424-201ENSMUST00000191727 561 ntBASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms