Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Gm12106-201ENSMUST00000116006 1200 ntBASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Gm6397-201ENSMUST00000161973 1069 ntBASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Gm19994-201ENSMUST00000217086 586 ntBASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Gm25517-201ENSMUST00000083865 134 ntBASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Gm7551-201ENSMUST00000089593 1074 ntBASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ptcd1Q8C2E4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Gm3332-201ENSMUST00000189337 928 ntBASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Gm3028-201ENSMUST00000213805 1119 ntBASIC15.06■□□□□ 0
Ptcd1Q8C2E4 AC122408.1-201ENSMUST00000218949 218 ntBASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Gm13142-201ENSMUST00000117213 1453 ntBASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ptcd1Q8C2E4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ptcd1Q8C2E4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ptcd1Q8C2E4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Ptcd1Q8C2E4 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ptcd1Q8C2E4 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Ptcd1Q8C2E4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ptcd1Q8C2E4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Gm8100-201ENSMUST00000182906 988 ntBASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Gm43184-201ENSMUST00000197247 542 ntBASIC15.05■□□□□ -0
Ptcd1Q8C2E4 AC153505.1-201ENSMUST00000218819 1071 ntBASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Gm6781-201ENSMUST00000038304 1242 ntBASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Snora73b-201ENSMUST00000083419 205 ntBASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ptcd1Q8C2E4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ptcd1Q8C2E4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ptcd1Q8C2E4 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ptcd1Q8C2E4 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ptcd1Q8C2E4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ptcd1Q8C2E4 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ptcd1Q8C2E4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC15.04■□□□□ -0
Ptcd1Q8C2E4 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.04■□□□□ -0
Ptcd1Q8C2E4 AC169511.2-201ENSMUST00000226674 2063 ntBASIC15.04■□□□□ -0
Ptcd1Q8C2E4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ptcd1Q8C2E4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ptcd1Q8C2E4 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC15.04■□□□□ -0
Ptcd1Q8C2E4 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms