Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cps1Q8C196 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Cps1Q8C196 Gm5641-201ENSMUST00000091130 1488 ntBASIC16.12■□□□□ 0.17
Cps1Q8C196 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Cps1Q8C196 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Gm1840-201ENSMUST00000051687 1432 ntBASIC16.11■□□□□ 0.17
Cps1Q8C196 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC16.11■□□□□ 0.17
Cps1Q8C196 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC16.11■□□□□ 0.17
Cps1Q8C196 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC16.11■□□□□ 0.17
Cps1Q8C196 Gm20495-201ENSMUST00000173902 235 ntBASIC16.11■□□□□ 0.17
Cps1Q8C196 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC16.11■□□□□ 0.17
Cps1Q8C196 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC16.11■□□□□ 0.17
Cps1Q8C196 Gm18204-201ENSMUST00000209835 793 ntBASIC16.11■□□□□ 0.17
Cps1Q8C196 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.11■□□□□ 0.17
Cps1Q8C196 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cps1Q8C196 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC16.1■□□□□ 0.17
Cps1Q8C196 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC16.1■□□□□ 0.17
Cps1Q8C196 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cps1Q8C196 Gm12247-201ENSMUST00000117585 670 ntBASIC16.1■□□□□ 0.17
Cps1Q8C196 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC16.1■□□□□ 0.17
Cps1Q8C196 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC16.1■□□□□ 0.17
Cps1Q8C196 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Gm7741-201ENSMUST00000181445 989 ntBASIC16.1■□□□□ 0.17
Cps1Q8C196 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC16.1■□□□□ 0.17
Cps1Q8C196 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Gm3433-201ENSMUST00000210149 1058 ntBASIC16.1■□□□□ 0.17
Cps1Q8C196 Mt1-202ENSMUST00000211807 1085 ntBASIC16.1■□□□□ 0.17
Cps1Q8C196 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cps1Q8C196 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cps1Q8C196 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cps1Q8C196 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cps1Q8C196 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cps1Q8C196 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC16.1■□□□□ 0.17
Cps1Q8C196 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cps1Q8C196 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cps1Q8C196 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cps1Q8C196 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cps1Q8C196 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cps1Q8C196 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cps1Q8C196 Gm14274-201ENSMUST00000117182 615 ntBASIC16.09■□□□□ 0.17
Cps1Q8C196 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC16.09■□□□□ 0.17
Cps1Q8C196 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cps1Q8C196 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC16.09■□□□□ 0.17
Cps1Q8C196 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Cps1Q8C196 AC153929.1-201ENSMUST00000219009 303 ntBASIC16.09■□□□□ 0.17
Cps1Q8C196 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cps1Q8C196 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cps1Q8C196 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cps1Q8C196 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cps1Q8C196 Kcnk16-202ENSMUST00000225596 2127 ntBASIC16.09■□□□□ 0.17
Cps1Q8C196 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cps1Q8C196 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cps1Q8C196 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cps1Q8C196 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cps1Q8C196 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cps1Q8C196 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cps1Q8C196 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Cps1Q8C196 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cps1Q8C196 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Cps1Q8C196 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cps1Q8C196 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms