Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Gm28882-201ENSMUST00000185504 314 ntBASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.74□□□□□ -0.37
Sh3rf3Q8C120 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Gm2991-201ENSMUST00000173338 480 ntBASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sh3rf3Q8C120 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.72□□□□□ -0.37
Sh3rf3Q8C120 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Sh3rf3Q8C120 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 122.2 ms