Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp47Q8BY87 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp47Q8BY87 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp47Q8BY87 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Usp47Q8BY87 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Usp47Q8BY87 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp47Q8BY87 Gm7114-201ENSMUST00000190159 1789 ntBASIC17.16■□□□□ 0.34
Usp47Q8BY87 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp47Q8BY87 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Usp47Q8BY87 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC17.16■□□□□ 0.34
Usp47Q8BY87 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp47Q8BY87 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp47Q8BY87 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp47Q8BY87 Mir680-2-201ENSMUST00000102163 110 ntBASIC17.15■□□□□ 0.34
Usp47Q8BY87 Gm23251-201ENSMUST00000103773 110 ntBASIC17.15■□□□□ 0.34
Usp47Q8BY87 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Gm12857-201ENSMUST00000117678 592 ntBASIC17.15■□□□□ 0.34
Usp47Q8BY87 Gm12036-201ENSMUST00000120008 530 ntBASIC17.15■□□□□ 0.34
Usp47Q8BY87 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Usp47Q8BY87 CT009713.8-201ENSMUST00000225448 560 ntBASIC17.15■□□□□ 0.34
Usp47Q8BY87 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp47Q8BY87 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Gm14724-201ENSMUST00000118400 537 ntBASIC17.15■□□□□ 0.34
Usp47Q8BY87 Gm23699-201ENSMUST00000158835 135 ntBASIC17.15■□□□□ 0.34
Usp47Q8BY87 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp47Q8BY87 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC17.15■□□□□ 0.34
Usp47Q8BY87 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Usp47Q8BY87 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Usp47Q8BY87 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Usp47Q8BY87 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Usp47Q8BY87 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Gm9192-201ENSMUST00000183221 985 ntBASIC17.14■□□□□ 0.33
Usp47Q8BY87 Gm19353-201ENSMUST00000184561 445 ntBASIC17.14■□□□□ 0.33
Usp47Q8BY87 Gm5733-201ENSMUST00000190232 939 ntBASIC17.14■□□□□ 0.33
Usp47Q8BY87 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp47Q8BY87 Gm8522-201ENSMUST00000118416 1929 ntBASIC17.14■□□□□ 0.33
Usp47Q8BY87 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp47Q8BY87 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp47Q8BY87 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Usp47Q8BY87 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp47Q8BY87 Gm19692-201ENSMUST00000203856 2084 ntBASIC17.13■□□□□ 0.33
Usp47Q8BY87 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Usp47Q8BY87 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp47Q8BY87 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp47Q8BY87 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Usp47Q8BY87 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp47Q8BY87 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Usp47Q8BY87 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp47Q8BY87 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Usp47Q8BY87 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Usp47Q8BY87 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Usp47Q8BY87 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp47Q8BY87 Gm20426-201ENSMUST00000173657 440 ntBASIC17.13■□□□□ 0.33
Usp47Q8BY87 Gm9034-201ENSMUST00000182071 1005 ntBASIC17.13■□□□□ 0.33
Usp47Q8BY87 Gm28686-201ENSMUST00000187404 609 ntBASIC17.13■□□□□ 0.33
Usp47Q8BY87 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC17.13■□□□□ 0.33
Usp47Q8BY87 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC17.13■□□□□ 0.33
Usp47Q8BY87 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Usp47Q8BY87 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp47Q8BY87 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp47Q8BY87 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms