Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Nup54Q8BTS4 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Gm12997-201ENSMUST00000120207 640 ntBASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Gm7003-201ENSMUST00000195089 312 ntBASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Gm43962-201ENSMUST00000203898 190 ntBASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup54Q8BTS4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm14208-201ENSMUST00000119645 678 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm24749-201ENSMUST00000157838 343 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm5616-201ENSMUST00000165252 384 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm8741-201ENSMUST00000174736 384 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm29615-201ENSMUST00000185371 697 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm28224-201ENSMUST00000186078 697 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm29001-201ENSMUST00000186177 697 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm28292-201ENSMUST00000186593 697 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm28101-201ENSMUST00000187608 697 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm29076-201ENSMUST00000187689 697 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm28302-201ENSMUST00000187931 697 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm28646-201ENSMUST00000188220 697 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm28205-201ENSMUST00000189177 697 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm29032-201ENSMUST00000189797 697 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm28695-201ENSMUST00000190300 697 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gm37448-201ENSMUST00000192795 697 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 AY036118-201ENSMUST00000200021 923 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup54Q8BTS4 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup54Q8BTS4 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms