Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Gm5354-201ENSMUST00000182417 973 ntBASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Gm29667-201ENSMUST00000190817 490 ntBASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.05□□□□□ -0.8
Smco3Q8BQM7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Smco3Q8BQM7 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Gm15487-201ENSMUST00000122373 465 ntBASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Gm27989-201ENSMUST00000184721 107 ntBASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Gm28693-202ENSMUST00000190758 331 ntBASIC10.04□□□□□ -0.8
Smco3Q8BQM7 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Smco3Q8BQM7 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms