Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Gm13117-201ENSMUST00000120894 691 ntBASIC17.05■□□□□ 0.32
Usp54Q8BL06 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Gm19587-201ENSMUST00000191395 545 ntBASIC17.05■□□□□ 0.32
Usp54Q8BL06 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Gm18514-201ENSMUST00000218980 436 ntBASIC17.05■□□□□ 0.32
Usp54Q8BL06 AC156501.1-201ENSMUST00000228219 270 ntBASIC17.05■□□□□ 0.32
Usp54Q8BL06 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Usp54Q8BL06 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Gm20495-201ENSMUST00000173902 235 ntBASIC17.04■□□□□ 0.32
Usp54Q8BL06 Gm9884-201ENSMUST00000194343 1222 ntBASIC17.04■□□□□ 0.32
Usp54Q8BL06 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Usp54Q8BL06 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp54Q8BL06 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp54Q8BL06 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp54Q8BL06 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp54Q8BL06 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC17.03■□□□□ 0.32
Usp54Q8BL06 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC17.03■□□□□ 0.32
Usp54Q8BL06 Gm12791-201ENSMUST00000120788 655 ntBASIC17.03■□□□□ 0.32
Usp54Q8BL06 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp54Q8BL06 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC17.03■□□□□ 0.32
Usp54Q8BL06 Gm37826-201ENSMUST00000195329 322 ntBASIC17.03■□□□□ 0.32
Usp54Q8BL06 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp54Q8BL06 Gm7002-201ENSMUST00000221386 2165 ntBASIC17.03■□□□□ 0.32
Usp54Q8BL06 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp54Q8BL06 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp54Q8BL06 CT030684.3-201ENSMUST00000227308 2445 ntBASIC17.03■□□□□ 0.32
Usp54Q8BL06 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp54Q8BL06 Gm14132-201ENSMUST00000117188 1719 ntBASIC17.03■□□□□ 0.32
Usp54Q8BL06 Gm38089-201ENSMUST00000193585 1514 ntBASIC17.03■□□□□ 0.32
Usp54Q8BL06 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp54Q8BL06 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp54Q8BL06 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp54Q8BL06 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp54Q8BL06 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp54Q8BL06 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp54Q8BL06 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp54Q8BL06 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp54Q8BL06 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp54Q8BL06 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp54Q8BL06 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp54Q8BL06 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp54Q8BL06 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Usp54Q8BL06 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp54Q8BL06 Gm21778-201ENSMUST00000178779 471 ntBASIC17.02■□□□□ 0.32
Usp54Q8BL06 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC17.02■□□□□ 0.32
Usp54Q8BL06 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp54Q8BL06 AC154572.1-201ENSMUST00000226098 1204 ntBASIC17.02■□□□□ 0.32
Usp54Q8BL06 Gm4604-201ENSMUST00000025040 390 ntBASIC17.02■□□□□ 0.32
Usp54Q8BL06 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp54Q8BL06 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC17.02■□□□□ 0.32
Usp54Q8BL06 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp54Q8BL06 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Usp54Q8BL06 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp54Q8BL06 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp54Q8BL06 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp54Q8BL06 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp54Q8BL06 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp54Q8BL06 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp54Q8BL06 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp54Q8BL06 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp54Q8BL06 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp54Q8BL06 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms