Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc40Q8BI79 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.83□□□□□ -0.36
Ccdc40Q8BI79 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Daam2-202ENSMUST00000224595 1926 ntBASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Gm19184-201ENSMUST00000196798 928 ntBASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Gm45930-201ENSMUST00000221330 292 ntBASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc40Q8BI79 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Gm24231-201ENSMUST00000104315 133 ntBASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Gm12502-201ENSMUST00000120197 444 ntBASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Gm7809-201ENSMUST00000153199 742 ntBASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Gm8018-201ENSMUST00000173536 789 ntBASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Gm3890-201ENSMUST00000182416 207 ntBASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Gm43433-201ENSMUST00000196573 481 ntBASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc40Q8BI79 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc40Q8BI79 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms