Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SynbQ8BI41 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SynbQ8BI41 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SynbQ8BI41 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SynbQ8BI41 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SynbQ8BI41 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SynbQ8BI41 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SynbQ8BI41 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SynbQ8BI41 Gm8959-201ENSMUST00000213150 571 ntBASIC11.73□□□□□ -0.53
SynbQ8BI41 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.73□□□□□ -0.53
SynbQ8BI41 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.73□□□□□ -0.53
SynbQ8BI41 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SynbQ8BI41 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
SynbQ8BI41 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SynbQ8BI41 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SynbQ8BI41 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SynbQ8BI41 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SynbQ8BI41 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SynbQ8BI41 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SynbQ8BI41 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SynbQ8BI41 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SynbQ8BI41 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SynbQ8BI41 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.72□□□□□ -0.53
SynbQ8BI41 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SynbQ8BI41 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.72□□□□□ -0.53
SynbQ8BI41 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
SynbQ8BI41 Gm14921-201ENSMUST00000118643 908 ntBASIC11.72□□□□□ -0.53
SynbQ8BI41 Gm12291-201ENSMUST00000121627 311 ntBASIC11.72□□□□□ -0.53
SynbQ8BI41 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.72□□□□□ -0.53
SynbQ8BI41 Gm22334-201ENSMUST00000158070 133 ntBASIC11.72□□□□□ -0.53
SynbQ8BI41 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SynbQ8BI41 Gm27023-201ENSMUST00000182372 285 ntBASIC11.72□□□□□ -0.53
SynbQ8BI41 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.72□□□□□ -0.53
SynbQ8BI41 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.72□□□□□ -0.53
SynbQ8BI41 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.72□□□□□ -0.53
SynbQ8BI41 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SynbQ8BI41 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.72□□□□□ -0.53
SynbQ8BI41 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.72□□□□□ -0.53
SynbQ8BI41 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SynbQ8BI41 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SynbQ8BI41 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SynbQ8BI41 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SynbQ8BI41 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SynbQ8BI41 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SynbQ8BI41 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
SynbQ8BI41 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.71□□□□□ -0.53
SynbQ8BI41 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.71□□□□□ -0.53
SynbQ8BI41 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.71□□□□□ -0.53
SynbQ8BI41 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.71□□□□□ -0.53
SynbQ8BI41 Gm11331-201ENSMUST00000119764 288 ntBASIC11.71□□□□□ -0.53
SynbQ8BI41 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.71□□□□□ -0.53
SynbQ8BI41 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.71□□□□□ -0.53
SynbQ8BI41 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.71□□□□□ -0.53
SynbQ8BI41 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
SynbQ8BI41 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.71□□□□□ -0.53
SynbQ8BI41 Gm19931-201ENSMUST00000198920 368 ntBASIC11.71□□□□□ -0.53
SynbQ8BI41 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.71□□□□□ -0.53
SynbQ8BI41 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.71□□□□□ -0.53
SynbQ8BI41 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SynbQ8BI41 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms