Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Gm24255-201ENSMUST00000104481 128 ntBASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Gm3096-201ENSMUST00000185770 364 ntBASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4bQ8BGE6 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Gm11930-201ENSMUST00000117788 190 ntBASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Gm19994-201ENSMUST00000217086 586 ntBASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4bQ8BGE6 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atg4bQ8BGE6 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Atg4bQ8BGE6 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.49□□□□□ -0.57
Atg4bQ8BGE6 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.49□□□□□ -0.57
Atg4bQ8BGE6 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atg4bQ8BGE6 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atg4bQ8BGE6 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.49□□□□□ -0.57
Atg4bQ8BGE6 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.49□□□□□ -0.57
Atg4bQ8BGE6 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms