Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.11□□□□□ -0.47
Ubp1Q811S7 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.11□□□□□ -0.47
Ubp1Q811S7 Gm24255-201ENSMUST00000104481 128 ntBASIC12.11□□□□□ -0.47
Ubp1Q811S7 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.11□□□□□ -0.47
Ubp1Q811S7 Gm14726-201ENSMUST00000120623 896 ntBASIC12.11□□□□□ -0.47
Ubp1Q811S7 Gm14381-201ENSMUST00000122105 414 ntBASIC12.11□□□□□ -0.47
Ubp1Q811S7 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Gm24845-201ENSMUST00000158034 109 ntBASIC12.11□□□□□ -0.47
Ubp1Q811S7 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.11□□□□□ -0.47
Ubp1Q811S7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ubp1Q811S7 AC173482.3-201ENSMUST00000225492 1212 ntBASIC12.11□□□□□ -0.47
Ubp1Q811S7 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.11□□□□□ -0.47
Ubp1Q811S7 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ubp1Q811S7 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.1□□□□□ -0.47
Ubp1Q811S7 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Gm14832-201ENSMUST00000121289 322 ntBASIC12.1□□□□□ -0.47
Ubp1Q811S7 Gm15547-201ENSMUST00000122152 333 ntBASIC12.1□□□□□ -0.47
Ubp1Q811S7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Gm44958-201ENSMUST00000203734 736 ntBASIC12.1□□□□□ -0.47
Ubp1Q811S7 Gm8712-201ENSMUST00000221090 701 ntBASIC12.1□□□□□ -0.47
Ubp1Q811S7 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ubp1Q811S7 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.09□□□□□ -0.47
Ubp1Q811S7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Gm23119-201ENSMUST00000158610 140 ntBASIC12.09□□□□□ -0.47
Ubp1Q811S7 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.09□□□□□ -0.47
Ubp1Q811S7 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.09□□□□□ -0.47
Ubp1Q811S7 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ubp1Q811S7 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms