Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vrk1Q80X41 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Vrk1Q80X41 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.69□□□□□ -0.54
Vrk1Q80X41 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.69□□□□□ -0.54
Vrk1Q80X41 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Gm7467-201ENSMUST00000185173 652 ntBASIC11.69□□□□□ -0.54
Vrk1Q80X41 Gm37835-201ENSMUST00000193305 361 ntBASIC11.69□□□□□ -0.54
Vrk1Q80X41 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Gm17827-201ENSMUST00000211825 742 ntBASIC11.69□□□□□ -0.54
Vrk1Q80X41 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.69□□□□□ -0.54
Vrk1Q80X41 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.69□□□□□ -0.54
Vrk1Q80X41 Gm5369-201ENSMUST00000217499 588 ntBASIC11.69□□□□□ -0.54
Vrk1Q80X41 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.69□□□□□ -0.54
Vrk1Q80X41 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.69□□□□□ -0.54
Vrk1Q80X41 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vrk1Q80X41 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.68□□□□□ -0.54
Vrk1Q80X41 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.68□□□□□ -0.54
Vrk1Q80X41 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.68□□□□□ -0.54
Vrk1Q80X41 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Gm23119-201ENSMUST00000158610 140 ntBASIC11.68□□□□□ -0.54
Vrk1Q80X41 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.68□□□□□ -0.54
Vrk1Q80X41 Mir7677-201ENSMUST00000184226 67 ntBASIC11.68□□□□□ -0.54
Vrk1Q80X41 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.68□□□□□ -0.54
Vrk1Q80X41 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.68□□□□□ -0.54
Vrk1Q80X41 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.68□□□□□ -0.54
Vrk1Q80X41 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.68□□□□□ -0.54
Vrk1Q80X41 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Ntng1-201ENSMUST00000051253 327 ntBASIC11.68□□□□□ -0.54
Vrk1Q80X41 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vrk1Q80X41 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.67□□□□□ -0.54
Vrk1Q80X41 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms