Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trim56Q80VI1 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim56Q80VI1 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim56Q80VI1 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim56Q80VI1 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim56Q80VI1 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Trim56Q80VI1 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.38□□□□□ -0.11
Trim56Q80VI1 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.38□□□□□ -0.11
Trim56Q80VI1 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim56Q80VI1 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Trim56Q80VI1 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Trim56Q80VI1 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim56Q80VI1 Matn2-203ENSMUST00000226766 3252 ntBASIC14.38□□□□□ -0.11
Trim56Q80VI1 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim56Q80VI1 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.37□□□□□ -0.11
Trim56Q80VI1 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm15711-201ENSMUST00000118889 535 ntBASIC14.37□□□□□ -0.11
Trim56Q80VI1 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm16505-201ENSMUST00000179981 232 ntBASIC14.37□□□□□ -0.11
Trim56Q80VI1 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm29615-201ENSMUST00000185371 697 ntBASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm28224-201ENSMUST00000186078 697 ntBASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm29001-201ENSMUST00000186177 697 ntBASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm28292-201ENSMUST00000186593 697 ntBASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm28101-201ENSMUST00000187608 697 ntBASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm29076-201ENSMUST00000187689 697 ntBASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm28302-201ENSMUST00000187931 697 ntBASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm28646-201ENSMUST00000188220 697 ntBASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm28205-201ENSMUST00000189177 697 ntBASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm29032-201ENSMUST00000189797 697 ntBASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm28695-201ENSMUST00000190300 697 ntBASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm37448-201ENSMUST00000192795 697 ntBASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.37□□□□□ -0.11
Trim56Q80VI1 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.37□□□□□ -0.11
Trim56Q80VI1 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.37□□□□□ -0.11
Trim56Q80VI1 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim56Q80VI1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim56Q80VI1 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim56Q80VI1 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim56Q80VI1 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim56Q80VI1 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim56Q80VI1 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim56Q80VI1 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.36□□□□□ -0.11
Trim56Q80VI1 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim56Q80VI1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim56Q80VI1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim56Q80VI1 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim56Q80VI1 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.36□□□□□ -0.11
Trim56Q80VI1 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim56Q80VI1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim56Q80VI1 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim56Q80VI1 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim56Q80VI1 Gm23200-201ENSMUST00000104379 132 ntBASIC14.36□□□□□ -0.11
Trim56Q80VI1 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim56Q80VI1 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.36□□□□□ -0.11
Trim56Q80VI1 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim56Q80VI1 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim56Q80VI1 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim56Q80VI1 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim56Q80VI1 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim56Q80VI1 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms