Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trim62Q80V85 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim62Q80V85 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim62Q80V85 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trim62Q80V85 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim62Q80V85 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim62Q80V85 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim62Q80V85 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim62Q80V85 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim62Q80V85 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Trim62Q80V85 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.63□□□□□ -0.39
Trim62Q80V85 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Trim62Q80V85 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim62Q80V85 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Gm13996-201ENSMUST00000118456 430 ntBASIC12.63□□□□□ -0.39
Trim62Q80V85 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.63□□□□□ -0.39
Trim62Q80V85 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim62Q80V85 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim62Q80V85 Gm43962-201ENSMUST00000203898 190 ntBASIC12.63□□□□□ -0.39
Trim62Q80V85 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim62Q80V85 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim62Q80V85 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim62Q80V85 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim62Q80V85 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim62Q80V85 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim62Q80V85 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.62□□□□□ -0.39
Trim62Q80V85 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Gm15610-201ENSMUST00000120584 195 ntBASIC12.62□□□□□ -0.39
Trim62Q80V85 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.62□□□□□ -0.39
Trim62Q80V85 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim62Q80V85 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.62□□□□□ -0.39
Trim62Q80V85 Gm27627-201ENSMUST00000183644 150 ntBASIC12.62□□□□□ -0.39
Trim62Q80V85 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim62Q80V85 Gm38241-201ENSMUST00000192641 898 ntBASIC12.62□□□□□ -0.39
Trim62Q80V85 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.62□□□□□ -0.39
Trim62Q80V85 Gm17812-201ENSMUST00000204935 318 ntBASIC12.62□□□□□ -0.39
Trim62Q80V85 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.62□□□□□ -0.39
Trim62Q80V85 Gm18212-201ENSMUST00000211678 889 ntBASIC12.62□□□□□ -0.39
Trim62Q80V85 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Trim62Q80V85 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim62Q80V85 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim62Q80V85 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim62Q80V85 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim62Q80V85 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim62Q80V85 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim62Q80V85 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim62Q80V85 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim62Q80V85 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim62Q80V85 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim62Q80V85 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim62Q80V85 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim62Q80V85 Gm11511-201ENSMUST00000118146 540 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms