Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Gm11434-201ENSMUST00000122379 629 ntBASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Gm12091-201ENSMUST00000146791 830 ntBASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Gm8652-201ENSMUST00000181363 964 ntBASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Gm45384-201ENSMUST00000210451 277 ntBASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scaf4Q6PFF0 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Scaf4Q6PFF0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scaf4Q6PFF0 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scaf4Q6PFF0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scaf4Q6PFF0 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scaf4Q6PFF0 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.02□□□□□ -0.48
Scaf4Q6PFF0 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.02□□□□□ -0.48
Scaf4Q6PFF0 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scaf4Q6PFF0 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scaf4Q6PFF0 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.02□□□□□ -0.48
Scaf4Q6PFF0 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scaf4Q6PFF0 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scaf4Q6PFF0 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Gm24830-201ENSMUST00000102024 166 ntBASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Gm6244-201ENSMUST00000178732 841 ntBASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Gm26232-201ENSMUST00000083360 166 ntBASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.02□□□□□ -0.49
Scaf4Q6PFF0 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.01□□□□□ -0.49
Scaf4Q6PFF0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms