Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Gm15615-201ENSMUST00000118876 198 ntBASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup98Q6PFD9 Gm15374-201ENSMUST00000119313 844 ntBASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Gm44506-201ENSMUST00000206278 965 ntBASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 AC118639.2-201ENSMUST00000226289 223 ntBASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Gm9358-201ENSMUST00000183067 927 ntBASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Mir8093-201ENSMUST00000185043 137 ntBASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Gm44329-201ENSMUST00000197469 112 ntBASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 AC134869.4-202ENSMUST00000224350 837 ntBASIC14.15□□□□□ -0.14
Nup98Q6PFD9 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Gm38089-201ENSMUST00000193585 1514 ntBASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup98Q6PFD9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Nup98Q6PFD9 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Lect2-202ENSMUST00000225183 823 ntBASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.14□□□□□ -0.15
Nup98Q6PFD9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.14□□□□□ -0.15
Nup98Q6PFD9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup98Q6PFD9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms