Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Gm14193-201ENSMUST00000105067 153 ntBASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Gm12164-201ENSMUST00000121695 551 ntBASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Gm22442-201ENSMUST00000157256 144 ntBASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Mir8115-201ENSMUST00000184992 119 ntBASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Gm43520-201ENSMUST00000197996 164 ntBASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Gm44065-201ENSMUST00000203184 3527 ntBASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Snrnp40Q6PE01 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Matn2-206ENSMUST00000228570 2798 ntBASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Gm13916-201ENSMUST00000117368 628 ntBASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Gm8815-201ENSMUST00000173809 620 ntBASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Gm44329-201ENSMUST00000197469 112 ntBASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Snrnp40Q6PE01 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm22920-201ENSMUST00000102175 109 ntBASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm11660-201ENSMUST00000120955 412 ntBASIC10.72□□□□□ -0.69
Snrnp40Q6PE01 Gm12628-201ENSMUST00000122193 382 ntBASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms