Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Gm14999-201ENSMUST00000121039 624 ntBASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Gm13342-201ENSMUST00000121055 207 ntBASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Gm27501-201ENSMUST00000183599 107 ntBASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Gm28196-201ENSMUST00000187719 640 ntBASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Gm44882-201ENSMUST00000205702 802 ntBASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Gm7046-201ENSMUST00000221351 977 ntBASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ParpbpQ6IRT3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Gm15198-201ENSMUST00000117283 177 ntBASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Gm13786-201ENSMUST00000122371 333 ntBASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Gm38266-201ENSMUST00000194931 421 ntBASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Morn2-202ENSMUST00000227729 656 ntBASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ParpbpQ6IRT3 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms