Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt42Q6IFX2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.5□□□□□ -0.41
Krt42Q6IFX2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Krt42Q6IFX2 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt42Q6IFX2 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt42Q6IFX2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt42Q6IFX2 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt42Q6IFX2 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt42Q6IFX2 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt42Q6IFX2 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Krt42Q6IFX2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.5□□□□□ -0.41
Krt42Q6IFX2 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Krt42Q6IFX2 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt42Q6IFX2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt42Q6IFX2 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.5□□□□□ -0.41
Krt42Q6IFX2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.49□□□□□ -0.41
Krt42Q6IFX2 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt42Q6IFX2 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Gm9083-201ENSMUST00000120423 819 ntBASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Gm6736-201ENSMUST00000166583 948 ntBASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt42Q6IFX2 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms